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RSV B
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GS_000X9MM.1
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Display Name: Japan/GS_000X9MM.1/2020-01-17
Langedijk,
A. C.; Lebbink,
R. J.; Bont,
L. J.; Evers,
A.
Submission details
Submission ID
PP376641.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-03-05 12:56:55 UTC
Date released
2025-03-05 13:15:59 UTC
Authors
Author affiliations
UMC Utrecht, Paediatric Infectious Diseases
Alignment states and QC metrics
Completeness
100.00%
Length
15226
Total ambiguous nucs
0
Total deleted nucs
0
Total frame shifts
0
Total inserted nucs
1
Total SNPs
196
Total unknown nucs
0
Sample details
Collection country
Japan
Collection date
2020-01-17
Isolate name
810103046
Host
Host name scientific
Homo sapiens
Host taxon id
9606
INSDC
INSDC accession
PP376641.1
NCBI release date
2024-04-09
NCBI update date
2024-04-09
Clade & Lineage
Lineage
A.D
Nucleotide mutations
Mutations called relative to the
NC_006432.1
reference
Substitutions
T
66
A
A
67
G
C
90
T
C
183
T
C
624
A
T
775
C
G
808
A
T
874
C
T
886
C
T
928
C
A
979
G
C
982
T
C
1012
T
A
1039
G
G
1042
A
G
1050
A
C
1257
T
T
1359
C
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Deletions
None
Insertions
ins_4174:A
Amino acid mutations
Mutations called relative to the
NC_006432.1
reference
Substitutions
G
G:
P
71
L
G:
H
90
Y
G:
L
101
F
G:
S
102
F
G:
G
106
R
G:
S
117
P
G:
S
121
N
G:
I
134
K
G:
T
138
I
G:
K
216
N
G:
G
224
E
G:
N
242
S
G:
S
243
I
G:
H
258
Y
G:
K
262
E
G:
I
265
L
G:
S
270
H
G:
E
271
K
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L
L:
Q
52
K
L:
P
171
L
L:
R
256
K
L:
V
335
I
L:
Y
598
H
L:
L
1438
Q
L:
K
1464
T
L:
N
1475
D
L:
K
1663
R
L:
N
1723
S
L:
E
1725
G
L:
G
1731
D
L:
G
1735
S
N
N:
V
97
I
N:
H
319
N
N:
V
352
A
NS2
NS2:
T
9
K
P
P:
L
55
P
P:
I
66
T
Deletions
None
Insertions
None
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