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GS_000X9HV.1
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Display Name: Germany/GS_000X9HV.1/2020-03-16
Langedijk,
A. C.; Lebbink,
R. J.; Bont,
L. J.; Evers,
A.
Submission details
Submission ID
PP376637.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-03-05 12:56:55 UTC
Date released
2025-03-05 13:15:59 UTC
Authors
Author affiliations
UMC Utrecht, Paediatric Infectious Diseases
Alignment states and QC metrics
Completeness
100.00%
Length
15223
Total ambiguous nucs
0
Total deleted nucs
2
Total frame shifts
0
Total inserted nucs
0
Total SNPs
178
Total unknown nucs
0
Sample details
Collection country
Germany
Collection date
2020-03-16
Isolate name
490103025
Host
Host name scientific
Homo sapiens
Host taxon id
9606
INSDC
INSDC accession
PP376637.1
NCBI release date
2024-04-09
NCBI update date
2024-04-09
Clade & Lineage
Lineage
A.D
Nucleotide mutations
Mutations called relative to the
NC_006432.1
reference
Substitutions
T
66
A
A
67
G
C
90
T
C
123
T
C
183
T
A
674
G
C
998
T
C
1012
T
A
1039
G
C
1047
T
G
1050
A
A
1072
T
T
1359
C
C
1566
T
C
1788
T
C
1806
T
A
1845
G
G
2022
A
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Deletions
3181, 4592
Insertions
None
Amino acid mutations
Mutations called relative to the
NC_006432.1
reference
Substitutions
F
F:
L
20
F
G
G:
P
71
L
G:
H
90
Y
G:
L
97
F
G:
L
101
F
G:
G
106
R
G:
S
121
N
G:
I
134
K
G:
P
143
S
G:
K
223
I
G:
G
224
E
G:
S
243
I
G:
K
262
E
G:
I
265
L
G:
P
274
L
G:
D
284
G
G:
P
300
S
G:
*
322
G
L
L:
D
148
N
L:
P
171
L
L:
R
256
K
L:
V
335
I
L:
Y
598
H
L:
L
1438
Q
L:
N
1723
S
L:
G
1731
D
L:
C
1733
R
N
N:
V
352
A
NS2
NS2:
I
26
V
P
P:
L
55
P
P:
S
99
T
Deletions
None
Insertions
None
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