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GS_000X9C6.1
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Display Name: Canada/GS_000X9C6.1/2018-12-16
A. C. Langedijk,
R. J. Lebbink,
L. J. Bont &
A. Evers
Submission details
Submission ID
PP376632.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-03-05 12:56:55 UTC
Date released
2025-03-05 13:15:59 UTC
Authors
Author affiliations
UMC Utrecht, Paediatric Infectious Diseases
Alignment states and QC metrics
Completeness
99.99%
Length
15227
Total ambiguous nucs
0
Total deleted nucs
0
Total frame shifts
0
Total inserted nucs
3
Total SNPs
165
Total unknown nucs
0
Sample details
Collection country
Canada
Collection date
2018-12-16
Isolate name
010102015
Host
Host name scientific
Homo sapiens
Host taxon id
9606
INSDC
INSDC accession
PP376632.1
NCBI release date
2024-04-09
NCBI update date
2024-04-09
Clade & Lineage
Lineage
A.D.3
Nucleotide mutations
Mutations called relative to the
NC_006432.1
reference
Substitutions
T
59
C
T
66
A
A
67
G
C
90
T
C
183
T
A
471
G
G
587
T
G
590
A
C
1012
T
G
1034
A
G
1050
A
G
1077
A
T
1359
C
T
1413
A
T
1422
C
C
1788
T
C
1806
T
T
2165
C
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Deletions
None
Insertions
ins_15115:T, ins_3148:TA
Amino acid mutations
Mutations called relative to the
NC_006432.1
reference
Substitutions
F
F:
T
12
I
G
G:
P
71
L
G:
H
90
Y
G:
L
101
F
G:
T
113
I
G:
V
131
D
G:
I
134
K
G:
N
178
G
G:
G
224
E
G:
S
243
I
G:
H
258
Q
G:
K
262
E
G:
I
265
L
G:
H
266
L
G:
D
284
G
G:
P
298
L
L
L:
P
171
L
L:
R
256
K
L:
Y
598
H
L:
L
835
M
L:
P
1089
S
L:
L
1438
Q
L:
N
1723
S
L:
E
1725
G
L:
G
1731
D
L:
T
2069
N
N
N:
V
352
A
P
P:
L
55
P
P:
T
92
M
Deletions
None
Insertions
None
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