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GS_000X99C.1
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Display Name: Netherlands/GS_000X99C.1/2018-01-16
A. C. Langedijk,
R. J. Lebbink,
L. J. Bont &
A. Evers
Submission details
Submission ID
PP376629.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-03-05 12:56:55 UTC
Date released
2025-03-05 13:15:59 UTC
Authors
Author affiliations
UMC Utrecht, Paediatric Infectious Diseases
Alignment states and QC metrics
Completeness
99.99%
Length
15222
Total ambiguous nucs
0
Total deleted nucs
1
Total frame shifts
0
Total inserted nucs
0
Total SNPs
163
Total unknown nucs
0
Sample details
Collection country
Netherlands
Collection date
2018-01-16
Isolate name
310101062
Host
Host name scientific
Homo sapiens
Host taxon id
9606
INSDC
INSDC accession
PP376629.1
NCBI release date
2024-04-09
NCBI update date
2024-04-09
Clade & Lineage
Lineage
A.D
Nucleotide mutations
Mutations called relative to the
NC_006432.1
reference
Substitutions
T
66
A
A
67
G
C
90
T
C
183
T
T
255
C
T
550
C
A
701
G
G
784
A
A
829
G
T
874
C
C
1012
T
C
1037
T
G
1050
A
T
1359
C
A
1362
G
A
1401
T
C
1788
T
C
1806
T
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Deletions
4592
Insertions
None
Amino acid mutations
Mutations called relative to the
NC_006432.1
reference
Substitutions
F
F:
A
102
V
F:
S
105
N
G
G:
P
71
L
G:
H
90
Y
G:
L
91
F
G:
L
101
F
G:
I
134
K
G:
G
224
E
G:
S
243
I
G:
K
262
E
G:
I
265
L
G:
D
284
G
G:
P
298
L
G:
T
319
N
L
L:
P
171
L
L:
R
256
K
L:
R
511
K
L:
Y
598
H
L:
L
1438
Q
L:
N
1723
S
L:
E
1725
G
L:
G
1731
D
L:
R
1759
K
L:
T
1786
I
L:
S
1964
L
M
M:
V
153
I
N
N:
V
352
A
NS2
NS2:
I
35
V
P
P:
L
55
P
P:
N
59
S
Deletions
None
Insertions
None
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