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GS_000X95L.1
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Display Name: Germany/GS_000X95L.1/2020-02-15
A. C. Langedijk,
R. J. Lebbink,
L. J. Bont &
A. Evers
Submission details
Submission ID
PP376625.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-03-05 12:56:55 UTC
Date released
2025-03-05 13:15:59 UTC
Authors
Author affiliations
UMC Utrecht, Paediatric Infectious Diseases
Alignment states and QC metrics
Completeness
100.00%
Length
15223
Total ambiguous nucs
0
Total deleted nucs
2
Total frame shifts
0
Total inserted nucs
0
Total SNPs
158
Total unknown nucs
0
Sample details
Collection country
Germany
Collection date
2020-02-15
Isolate name
490103019
Host
Host name scientific
Homo sapiens
Host taxon id
9606
INSDC
INSDC accession
PP376625.1
NCBI release date
2024-04-09
NCBI update date
2024-04-09
Clade & Lineage
Lineage
A.D.2.1
Nucleotide mutations
Mutations called relative to the
NC_006432.1
reference
Substitutions
T
66
A
C
165
T
C
438
T
C
480
T
C
594
A
T
754
A
C
1012
T
G
1050
A
T
1359
C
G
1368
A
A
1539
G
G
1560
A
C
1788
T
C
1806
T
T
1897
C
T
2165
C
T
2250
C
C
2368
T
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Deletions
4174, 15053
Insertions
None
Amino acid mutations
Mutations called relative to the
NC_006432.1
reference
Substitutions
F
F:
L
195
I
G
G:
H
67
N
G:
P
71
L
G:
H
90
Y
G:
L
101
F
G:
T
107
P
G:
P
120
T
G:
L
142
S
G:
G
224
E
G:
K
240
R
G:
S
243
I
G:
I
265
L
G:
P
274
L
G:
Y
280
H
G:
D
284
G
G:
E
287
D
G:
S
294
P
G:
V
303
I
G:
Y
304
H
G:
T
319
S
L
L:
I
59
V
L:
G
144
E
L:
P
171
L
L:
K
175
R
L:
R
256
K
L:
P
610
S
L:
L
1438
Q
L:
K
1589
R
L:
S
1593
N
L:
H
1599
R
L:
N
1723
S
L:
G
1731
D
N
N:
V
352
A
P
P:
L
55
P
P:
T
69
A
SH
SH:
I
21
V
Deletions
None
Insertions
None
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