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GS_000X6PL.1
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Display Name: GS_000X6PL.1/2024-03-19
Lauring,
A. S.; Papalambros,
L. K.
Submission details
Submission ID
PP903814.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2024-11-21 13:21:37 UTC
Date released
2024-11-21 13:41:50 UTC
Data use terms
Data use terms
OPEN
✕
Data Use Terms History
Changed
User
Data Use Terms
2024-11-21 13:22
insdc_ingest_user
OPEN
Close
(history)
Authors
Author affiliations
University Of Michigan, Internal Medicine - Infectious Disease
INSDC
Bioproject accession
PRJNA1079770
INSDC accession
PP903814.1
NCBI release date
2024-06-16
NCBI update date
2024-06-16
Alignment states and QC metrics
Completeness
92.71%
Length
14684
Total ambiguous nucs
0
Total deleted nucs
0
Total frame shifts
0
Total inserted nucs
1
Total SNPs
201
Total unknown nucs
568
Sample details
Collection country
USA
Collection date
2024-03-19
Isolate name
hRSV-A-G43S14A4
Host
Host name scientific
Homo sapiens
Host taxon id
9606
Clade & Lineage
Lineage
A.D.3
Nucleotide mutations
Substitutions
G
587
T
C
597
T
G
652
A
T
673
C
C
1012
T
G
1034
A
G
1050
A
G
1077
A
C
1173
T
T
1209
A
G
1230
A
T
1359
C
A
1404
T
T
1413
A
T
1422
C
T
1644
C
C
1788
T
C
1806
T
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Deletions
None
Insertions
ins_3154:A
Amino acid mutations
Substitutions
F
F:
T
12
I
F:
T
122
A
F:
S
276
N
G
G:
P
71
L
G:
H
90
Y
G:
P
95
S
G:
L
101
F
G:
T
113
I
G:
A
116
D
G:
P
126
S
G:
V
131
D
G:
I
134
K
G:
T
137
I
G:
N
178
G
G:
G
224
E
G:
P
230
T
G:
T
241
P
G:
S
243
I
G:
H
258
Q
G:
K
262
E
G:
I
265
L
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L
L:
P
171
L
L:
A
173
S
L:
R
256
K
L:
L
315
H
L:
S
576
G
L:
Y
598
H
L:
L
835
M
L:
V
1431
A
L:
L
1438
Q
L:
N
1723
S
L:
E
1725
G
L:
G
1731
D
L:
H
1804
L
L:
I
1949
V
N
N:
V
352
A
NS2
NS2:
M
18
I
P
P:
L
55
P
P:
T
72
N
P:
T
92
M
P:
R
191
K
Deletions
None
Insertions
None
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