Display Name: GS_000E4G4.1/2024-06-22
Acuna, D.; Palau, M. J.; Vera, A.; Vescina, C. M.; Trevino, N. P.; Eguiguren, M. P.; Fernandez Gago, G.; Alancay, A.; Nadalich, V.; Angeletti, A.; Cordero, A.; Irazoqui, M.; Viegas, M.

Submission details

Submission ID
PQ492135.1
Date submitted
2024-11-21 13:19:36 UTC
Date released
2024-11-21 13:33:45 UTC

Data use terms

Data use terms
OPEN

Authors

Author affiliations
Conicet (National Council for Scientific and Technical Research), Exacts Sciences School, National University of la Plata, Argentina

Alignment states and QC metrics

Completeness
98.29%
Length
14961
Total ambiguous nucs
0
Total deleted nucs
1
Total frame shifts
0
Total inserted nucs
0
Total SNPs
107
Total unknown nucs
0

Sample details

Collection country
Argentina
Collection date
2024-06-22
Isolate name
RSVB/Argentina/PAIS-ALM/44/2024_06_22

Host

Host name scientific
Homo sapiens
Host taxon id

INSDC

INSDC accession
NCBI release date
2024-10-28
NCBI update date
2024-10-28

Clade & Lineage

Lineage
B.D.E.1

Nucleotide mutations

Substitutions

  • A276G
  • G332A
  • G513T
  • G579A
  • C628T
  • C998A
  • G1385A
  • G1732A
  • C2074T
  • C2198T
  • C2691T
  • C2707T
  • G2977A
  • C3000T
  • G3036C
  • C3082T
  • T3095C
  • T3096C
  • Deletions
    973
    Insertions
    None

    Amino acid mutations

    Substitutions

    F

  • F:S389P
  • G

  • G:A74V
  • G:S100G
  • G:I137T
  • G:P214S
  • G:P221L
  • G:I252T
  • G:K256N
  • G:I268T
  • G:S275P
  • G:Y285H
  • L

  • L:S8N
  • L:K570R
  • L:N590S
  • L:R1759K
  • L:T1987I
  • N

  • N:V97I
  • NS1

  • NS1:K74E
  • P

  • P:D225N
  • SH

  • SH:I49M
  • Deletions
    None
    Insertions
    None