GS_000E0CG.1

Display Name: Germany/GS_000E0CG.1/2011-01-01
C. Prifert, A. Streng, J. Schultz, J. G. Liese, B. Weissbrich & D. Hofmann

Submission details

Submission ID
MG930138.1
Submitting group
Date submitted
2025-03-05 12:56:13 UTC
Date released
2025-03-05 13:03:31 UTC

Authors

Author affiliations
Institute of Virology and Immunobiology, University of Wuerzburg

Alignment states and QC metrics

Completeness
2.19%
Length
261
Total ambiguous nucs
0
Total deleted nucs
72
Total frame shifts
0
Total inserted nucs
0
Total SNPs
17
Total unknown nucs
0

Sample details

Collection country
Germany
Collection subdivision level 1
Wuerzburg
Collection date
2011-01-01

Host

Host name scientific
Homo sapiens
Host taxon id

INSDC

INSDC accession
NCBI release date
2018-03-19
NCBI update date
2018-03-19

Clade & Lineage

Lineage
A.3.1

Nucleotide mutations

Mutations called relative to the NC_006432.1 reference

Substitutions

  • G5322A
  • T5332C
  • T5341C
  • G5346A
  • A5360G
  • A5361C
  • T5368C
  • A5369G
  • C5374A
  • G5379T
  • A5409C
  • C5423T
  • G5509T
  • T5540A
  • C5544T
  • T5570A
  • T5592C
    • Deletions
    5435-5506
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_006432.1 reference

    Substitutions

    G

  • G:G224E
  • G:G232E
  • G:N237A
  • G:K240E
  • G:S243I
  • G:K253T
  • G:H258Y
  • G:K262D
  • G:Y297N
  • G:P298L
  • G:S307T
  • G:L314P
    • Deletions
    G:265-288
    Insertions
    None