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GS_000DV7Z.1
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Display Name: Taiwan/GS_000DV7Z.1/2011-01-01
Chi, H.;
Hsiao, K.-L.;
Weng, L.-C.;
Chiu, N.-C.;
Huang, L.-M.;
Chiu, Y.-Y.;
Liu, C.-P.;
Liu, H.-F.
Submission details
Submission ID
MF496503.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-03-05 12:56:13 UTC
Date released
2025-03-05 13:03:31 UTC
Authors
Author affiliations
Mackay Memorial Hospital, Pediatrics
Alignment states and QC metrics
Completeness
4.37%
Length
594
Total ambiguous nucs
0
Total deleted nucs
72
Total frame shifts
0
Total inserted nucs
0
Total SNPs
16
Total unknown nucs
0
Sample details
Collection country
Taiwan
Collection date
2011-01-01
Isolate name
R100-41
Host
Host name scientific
Homo sapiens
Host taxon id
9606
INSDC
INSDC accession
MF496503.1
NCBI release date
2017-08-30
NCBI update date
2017-08-30
Clade & Lineage
Lineage
A.3.1.1
Nucleotide mutations
Mutations called relative to the
NC_006432.1
reference
Substitutions
C
4952
T
C
5027
T
C
5040
T
T
5052
A
G
5322
A
T
5332
C
G
5346
A
A
5360
G
T
5368
C
C
5374
A
G
5379
T
C
5390
A
A
5409
C
C
5544
T
T
5592
C
C
5605
T
Deletions
5435-5506
Insertions
None
Amino acid mutations
Mutations called relative to the
NC_006432.1
reference
Substitutions
G
G:
L
101
F
G:
P
126
S
G:
T
130
I
G:
I
134
K
G:
G
224
E
G:
G
232
E
G:
N
237
D
G:
S
243
I
G:
L
247
M
G:
K
253
T
G:
P
298
L
G:
L
314
P
Deletions
G:262-285
Insertions
None
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