GS_000DUYH.1

Display Name: GS_000DUYH.1/2024-04-18
Lauring, A. S.; Bendall, E. E.

Submission details

Submission ID
PQ083790.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2024-11-21 13:19:36 UTC
Date released
2024-11-21 13:33:45 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2024-11-21 13:20insdc_ingest_userOPEN

Authors

Author affiliations
University of Michigan, Department of Microbiology

INSDC

Bioproject accession
PRJNA1079770
INSDC accession
PQ083790.1
NCBI release date
2024-07-31
NCBI update date
2024-07-31

Alignment states and QC metrics

Completeness
94.72%
Length
14969
Total ambiguous nucs
0
Total deleted nucs
0
Total frame shifts
0
Total inserted nucs
0
Total SNPs
130
Total unknown nucs
550

Sample details

Collection country
USA
Collection date
2024-04-18
Isolate name
hRSV-B-G43S32G2

Host

Host name scientific
Homo sapiens
Host taxon id
9606

Clade & Lineage

Lineage
B.D.4.1.1

Nucleotide mutations

Substitutions

  • G167A
  • G513T
  • C515T
  • T519C
  • G579A
  • C601T
  • C610T
  • T1177C
  • A1252G
  • G1385A
  • C1684T
  • T1846C
  • A1954G
  • T2113C
  • C2198T
  • C2553T
  • T2589C
  • T2601A
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Substitutions

    F

  • F:E66G
  • F:P112L
  • F:S190N
  • F:N524S

    • G

  • G:R98G
  • G:S100G
  • G:T122P
  • G:I137T
  • G:Q142L
  • G:P245S
  • G:T279A
  • G:L284P
  • G:T300I

    • L

  • L:I156V
  • L:Y177N
  • L:A1479V
  • L:V1533F
  • L:T1742M
  • L:N1916Y
  • L:A1943T
  • L:T1987I
  • L:A2119V

    • N

  • N:V97I

    • SH

  • SH:I36V
  • SH:I49P
    • Deletions
    None
    Insertions
    None