GS_000DU8Y.1

Display Name: GS_000DU8Y.1/2024-04-21
Lauring, A. S.; Bendall, E. E.

Submission details

Submission ID
PQ083766.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2024-11-21 13:19:36 UTC
Date released
2024-11-21 13:33:15 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2024-11-21 13:20insdc_ingest_userOPEN

Authors

Author affiliations
University of Michigan, Department of Microbiology

INSDC

Bioproject accession
PRJNA1079770
INSDC accession
PQ083766.1
NCBI release date
2024-07-31
NCBI update date
2024-07-31

Alignment states and QC metrics

Completeness
87.70%
Length
14939
Total ambiguous nucs
0
Total deleted nucs
1
Total frame shifts
0
Total inserted nucs
0
Total SNPs
126
Total unknown nucs
1590

Sample details

Collection country
USA
Collection date
2024-04-21
Isolate name
hRSV-B-G43S29W7

Host

Host name scientific
Homo sapiens
Host taxon id
9606

Clade & Lineage

Lineage
B.D.E.1

Nucleotide mutations

Substitutions

  • G513T
  • G579A
  • C583T
  • G599A
  • G1028A
  • G1385A
  • G1732A
  • G1768A
  • T1846C
  • C2074T
  • C2198T
  • C2554T
  • T2589C
  • C2691T
  • G3036C
  • A3060G
  • C3067T
  • C3082T
    • Deletions
    973
    Insertions
    None

    Amino acid mutations

    Substitutions

    F

  • F:F12I
  • F:L22P
  • F:S190N
  • F:S211N
  • F:S389P

    • G

  • G:S100G
  • G:A107T
  • G:P109S
  • G:A116T
  • G:T131A
  • G:I137T
  • G:P214S
  • G:P221L
  • G:P245S
  • G:I252T
  • G:T254I
  • G:I268T
  • G:A269V
  • G:T273I
  • G:S275P
  • G:Y285H

    • L

  • L:S169P
  • L:K570R
  • L:L1031I
  • L:T1987I

    • N

  • N:V97I

    • NS2

  • NS2:D6N
    • Deletions
    None
    Insertions
    None