GS_000DU2A.1

Display Name: GS_000DU2A.1/2024-04-11
Lauring, A. S.; Bendall, E. E.

Submission details

Submission ID
PQ083760.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2024-11-21 13:19:36 UTC
Date released
2024-11-21 13:33:15 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2024-11-21 13:20insdc_ingest_userOPEN

Authors

Author affiliations
University of Michigan, Department of Microbiology

INSDC

Bioproject accession
PRJNA1079770
INSDC accession
PQ083760.1
NCBI release date
2024-07-31
NCBI update date
2024-07-31

Alignment states and QC metrics

Completeness
99.49%
Length
15146
Total ambiguous nucs
0
Total deleted nucs
2
Total frame shifts
0
Total inserted nucs
4
Total SNPs
130
Total unknown nucs
0

Sample details

Collection country
USA
Collection date
2024-04-11
Isolate name
hRSV-B-G43S31F8

Host

Host name scientific
Homo sapiens
Host taxon id
9606

Clade & Lineage

Lineage
B.D.E.1

Nucleotide mutations

Substitutions

  • G513T
  • G579A
  • C598A
  • A608G
  • A957G
  • C998A
  • G1385A
  • C1429T
  • G1732A
  • T1846C
  • C2074T
  • C2198T
  • A2224G
  • G2310A
  • T2478C
  • C2483T
  • C2554T
  • C2577T
    • Deletions
    973, 4586
    Insertions
    ins_15092:ATAT

    Amino acid mutations

    Substitutions

    F

  • F:S190N
  • F:S211N
  • F:S389P
  • F:T523A

    • G

  • G:A74V
  • G:I87T
  • G:S100G
  • G:T131A
  • G:I137T
  • G:P214S
  • G:P221L
  • G:P245S
  • G:I252T
  • G:K256N
  • G:S265L
  • G:I268T
  • G:A269V
  • G:S275P
  • G:Y285H
  • G:A301V

    • L

  • L:V226I
  • L:K570R
  • L:V1043I
  • L:R1759K
  • L:K1947N
  • L:T1987I

    • N

  • N:V97I

    • NS2

  • NS2:N5K
  • NS2:T9A

    • P

  • P:T60I
    • Deletions
    None
    Insertions
    None