GS_000DU1C.1

Display Name: GS_000DU1C.1/2024-04-30
Lauring, A. S.; Bendall, E. E.

Submission details

Submission ID
PQ083759.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2024-11-21 13:19:36 UTC
Date released
2024-11-21 13:33:15 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2024-11-21 13:20insdc_ingest_userOPEN

Authors

Author affiliations
University of Michigan, Department of Microbiology

INSDC

Bioproject accession
PRJNA1079770
INSDC accession
PQ083759.1
NCBI release date
2024-07-31
NCBI update date
2024-07-31

Alignment states and QC metrics

Completeness
97.28%
Length
14940
Total ambiguous nucs
0
Total deleted nucs
2
Total frame shifts
0
Total inserted nucs
0
Total SNPs
113
Total unknown nucs
134

Sample details

Collection country
USA
Collection date
2024-04-30
Isolate name
hRSV-B-G43S34I3

Host

Host name scientific
Homo sapiens
Host taxon id
9606

Clade & Lineage

Lineage
B.D.E.1

Nucleotide mutations

Substitutions

  • T224C
  • G513C
  • G579A
  • C606A
  • A769G
  • C998A
  • T1041G
  • C1330T
  • G1385A
  • G1732A
  • C2074T
  • C2198T
  • T2346C
  • T2355C
  • C2554T
  • C2577T
  • C2691T
  • G3036C
    • Deletions
    973, 4586
    Insertions
    None

    Amino acid mutations

    Substitutions

    F

  • F:S190N
  • F:S211N
  • F:S389P

    • G

  • G:A74V
  • G:S100G
  • G:T131A
  • G:I137T
  • G:P214S
  • G:P221L
  • G:I252T
  • G:K256N
  • G:I268T
  • G:A269V
  • G:S275P
  • G:Y285H
  • G:P289S

    • L

  • L:K570R
  • L:S970N
  • L:A1694D
  • L:T1987I

    • N

  • N:V97I

    • NS2

  • NS2:T8N

    • SH

  • SH:M60I
    • Deletions
    None
    Insertions
    None