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GS_000D9UA.1
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Display Name: Japan/GS_000D9UA.1/2021-06-29
T. Ono,
K. Hashimoto,
S. Norito,
Y. Kume,
M. Chishiki,
H. Okabe,
M. Sato,
J. Aso,
M. Sada,
I. Mochizuki,
F. Mashiyama,
N. Ishibashi,
S. Suziki,
H. Sakuma,
M. Takeda,
K. Shirato,
H. Kimura,
M. Hosoya &
M. Chisiki
Submission details
Submission ID
LC712560.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-03-05 12:56:13 UTC
Date released
2025-03-05 13:02:29 UTC
Authors
Author affiliations
Pediatrics; 1 Hikariga-oka, Fukushima, Fukushima 960-1295
Alignment states and QC metrics
Completeness
2.19%
Length
333
Total ambiguous nucs
0
Total deleted nucs
0
Total frame shifts
0
Total inserted nucs
0
Total SNPs
8
Total unknown nucs
0
Sample details
Collection country
Japan
Collection subdivision level 1
Fukushima
Collection date
2021-06-29
Isolate name
Fukushima/RSVA/OR-284/2021
Host
Host name scientific
Homo sapiens
Host taxon id
9606
INSDC
INSDC accession
LC712560.1
NCBI release date
2023-02-02
NCBI update date
2023-02-02
Clade & Lineage
Lineage
A.D.2.2
Nucleotide mutations
Mutations called relative to the
NC_006432.1
reference
Substitutions
T
5293
C
G
5322
A
A
5347
G
C
5374
A
C
5425
T
G
5430
A
A
5444
C
A
5502
G
Deletions
None
Insertions
None
Amino acid mutations
Mutations called relative to the
NC_006432.1
reference
Substitutions
G
G:
G
224
E
G:
S
260
N
G:
I
265
L
G:
D
284
G
Deletions
None
Insertions
None
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