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GS_000D9SE.1
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Display Name: Japan/GS_000D9SE.1/2021-06-23
Ono, T.;
Hashimoto, K.;
Norito, S.;
Kume, Y.;
Chishiki, M.;
Okabe, H.;
Sato, M.;
Aso, J.;
Sada, M.;
Mochizuki, I.;
Mashiyama, F.;
Ishibashi, N.;
Suziki, S.;
Sakuma, H.;
Takeda, M.;
Shirato, K.;
Kimura, H.;
Hosoya, M.;
Chisiki, M.
Submission details
Submission ID
LC712558.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-03-05 12:56:13 UTC
Date released
2025-03-05 13:02:29 UTC
Authors
Author affiliations
Pediatrics; 1 Hikariga-oka, Fukushima, Fukushima 960-1295
Alignment states and QC metrics
Completeness
2.19%
Length
333
Total ambiguous nucs
0
Total deleted nucs
0
Total frame shifts
0
Total inserted nucs
0
Total SNPs
9
Total unknown nucs
0
Sample details
Collection country
Japan
Collection subdivision level 1
Fukushima
Collection date
2021-06-23
Isolate name
Fukushima/RSVA/OR-276/2021
Host
Host name scientific
Homo sapiens
Host taxon id
9606
INSDC
INSDC accession
LC712558.1
NCBI release date
2023-02-02
NCBI update date
2023-02-02
Clade & Lineage
Lineage
A.D.2.2
Nucleotide mutations
Mutations called relative to the
NC_006432.1
reference
Substitutions
T
5293
C
G
5322
A
A
5347
G
C
5374
A
C
5425
T
G
5430
A
A
5444
C
A
5502
G
A
5508
G
Deletions
None
Insertions
None
Amino acid mutations
Mutations called relative to the
NC_006432.1
reference
Substitutions
G
G:
G
224
E
G:
S
260
N
G:
I
265
L
G:
D
284
G
G:
E
286
G
Deletions
None
Insertions
None
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