GS_000D5X8.1

Display Name: GS_000D5X8.1/2024-04-03
Lauring, A. S.; Papalambros, L. K.

Submission details

Submission ID
PP896783.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2024-11-21 13:19:36 UTC
Date released
2024-11-21 13:32:14 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2024-11-21 13:20insdc_ingest_userOPEN

Authors

Author affiliations
University Of Michigan, Internal Medicine - Infectious Disease

INSDC

Bioproject accession
PRJNA1079770
INSDC accession
PP896783.1
NCBI release date
2024-06-16
NCBI update date
2024-06-16

Alignment states and QC metrics

Completeness
95.74%
Length
14940
Total ambiguous nucs
0
Total deleted nucs
2
Total frame shifts
0
Total inserted nucs
0
Total SNPs
127
Total unknown nucs
369

Sample details

Collection country
USA
Collection date
2024-04-03
Isolate name
hRSV-B-G43S21R3

Host

Host name scientific
Homo sapiens
Host taxon id
9606

Clade & Lineage

Lineage
B.D.E.1

Nucleotide mutations

Substitutions

  • T221C
  • G513T
  • G579A
  • C601T
  • C998A
  • T1189C
  • T1192C
  • G1385A
  • G1732A
  • T1846C
  • C2074T
  • C2198T
  • A2547G
  • C2554T
  • C2691T
  • C3000T
  • C3003T
  • G3036C
    • Deletions
    973, 4586
    Insertions
    None

    Amino acid mutations

    Substitutions

    F

  • F:S190N
  • F:S211N
  • F:S389P

    • G

  • G:A74V
  • G:S100G
  • G:T131A
  • G:I137T
  • G:P214S
  • G:L217P
  • G:P221L
  • G:V249A
  • G:I252T
  • G:I268T
  • G:A269V
  • G:S275P
  • G:Y285H
  • G:T296A

    • L

  • L:C380Y
  • L:K570R
  • L:T1234S
  • L:E1714K
  • L:T1987I

    • N

  • N:V97I

    • SH

  • SH:F50L
  • SH:M60I
    • Deletions
    None
    Insertions
    None