GS_000D5UE.1

Display Name: Myanmar/GS_000D5UE.1/2018-08-03
Phyu, W. W.; Saito, R.

Submission details

Submission ID
LC552118.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-03-05 12:56:13 UTC
Date released
2025-03-05 13:02:29 UTC

Authors

Author affiliations
International Health, Public Health; 1-757 Asahimachi dori, Niigata, Niigata 951-8510

Alignment states and QC metrics

Completeness
2.03%
Length
309
Total ambiguous nucs
0
Total deleted nucs
0
Total frame shifts
0
Total inserted nucs
0
Total SNPs
12
Total unknown nucs
0

Sample details

Collection country
Myanmar
Collection date
2018-08-03

Host

Host name scientific
Homo sapiens
Host taxon id
9606

INSDC

INSDC accession
LC552118.1
NCBI release date
2020-06-03
NCBI update date
2020-06-03

Clade & Lineage

Lineage
A.D

Nucleotide mutations

Mutations called relative to the NC_006432.1 reference

Substitutions

  • G5322A
  • C5374A
  • G5379T
  • C5397T
  • C5401T
  • A5444C
  • C5472T
  • A5502G
  • G5507A
  • C5544T
  • C5601T
  • G5616T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_006432.1 reference

    Substitutions

    G

  • G:G224E
  • G:S243I
  • G:T249I
  • G:I265L
  • G:P274L
  • G:D284G
  • G:E286K
  • G:P298L
  • G:S317F
  • G:*322L
    • Deletions
    None
    Insertions
    None